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BioHackathon 2015: Semantics of data for life sciences and reproducible research

Toshiaki Katayama, Rutger A. Vos, Hiroyuki Mishima, Shin Kawano, Shuichi Kawashima, Jin-Dong Kim, Yuki Moriya, Toshiaki Tokimatsu, Atsuko Yamaguchi, Yasunori Yamamoto, Hongyan Wu, Peter Amstutz, Erick Antezana, Nobuyuki P. Aoki, Kazuharu Arakawa, Jerven T. Bolleman, Evan Bolton, Raoul J. P. Bonnal, Hidemasa Bono, Kees Burger, Hirokazu Chiba, Kevin B. Cohen, Eric W. Deutsch, Jesualdo T. Fernández-Breis, Gang Fu, Takatomo Fujisawa, Atsushi Fukushima, Alexander García, Naohisa Goto, Tudor Groza, Colin Hercus, Robert Hoehndorf, Kotone Itaya, Nick Juty, Takeshi Kawashima, Jee-Hyub Kim, Akira R. Kinjo, Masaaki Kotera, Kouji Kozaki, Sadahiro Kumagai, Tatsuya Kushida, Thomas Lütteke, Masaaki Matsubara, Joe Miyamoto, Attayeb Mohsen, Hiroshi Mori, Yuki Naito, Takeru Nakazato, Jeremy Nguyen-Xuan, Kozo Nishida, Naoki Nishida, Hiroyo Nishide, Soichi Ogishima, Tazro Ohta, Shujiro Okuda, Benedict Paten, Jean-Luc Perret, Philip Prathipati, Pjotr Prins, Núria Queralt-Rosinach, Daisuke Shinmachi, Shinya Suzuki, Tsuyosi Tabata, Terue Takatsuki, Kieron Taylor, Mark Thompson, Ikuo Uchiyama, Bruno Vieira, Chih-Hsuan Wei, Mark Wilkinson, Issaku Yamada, Ryota Yamanaka, Kazutoshi Yoshitake, Akiyasu C. Yoshizawa, Michel Dumontier, Kenjiro Kosaki, Toshihisa Takagi
We report on the activities of the 2015 edition of the BioHackathon, an annual event that brings together researchers and developers …

Survival rates and associated factors of colorectal cancer patients in Brunei Darussalam

Elvynna Leong, Sok King Ong, Fadhliah Madli, Abby Tan, Daphne Lai, Norwani Basir, Noraslinah Ramlee, Vui Heng Chong
Background: Colorectal cancer (CRC) is the third most common cancer in both men and women. In most Asian countries, both the incidence …

Automated Classification of Tropical Plant Species Data Based on Machine Learning Techniques and Leaf Trait Measurements

Burhan Rashid Hussein, Owais Ahmed Malik, Wee-Hong Ong, Johan Willem Frederik Slik
The identification of plant species is fundamental for effective study and management of biodiversity. For automated plant species …

Semantic Segmentation of Herbarium Specimens Using Deep Learning Techniques

Burhan Rashid Hussein, Owais Ahmed Malik, Wee-Hong Ong, Johan Willem Frederik Slik
Automated identification of herbarium species is of great interest as quite a number of these collections are still unidentified while …

Antibiofilm action of zno, sno2 and ceo2 nanoparticles towards gram-positive biofilm forming pathogenic bacteria

Fazlurrahman Khan, Jang-Won Lee, Dung N. T. Pham, Mohammad M. Khan, Seul-Ki Park, Il-Shik Shin, Young-Mog Kim
Background: The ability to form biofilm and produce several virulence factors has caused numerous human pathogens to become …